Domain ID e1rcoK2

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: RuBisCO_large
UID: 000095607
Type: Automatic domain
Parent: e5rubA2
Range: K:151-475
Ligands: XDP
PDB: 1rco
PDB Description: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
UniProt: P00875
Species: Spinacia oleracea

Structure of domain e1rcoK2

Domains in the same chain:

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e1rcoK1 K:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoK2 K:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e1rcoB1 B:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoB2 B:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoC1 C:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoE1 E:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoE2 E:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoF1 F:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoH1 H:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoH2 H:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoI1 I:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoK1 K:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoK2 K:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoL1 L:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoL2 L:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoM1 M:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoO1 O:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoO2 O:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoP1 P:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoR1 R:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoR2 R:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoS1 S:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoT1 T:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoV1 V:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoV2 V:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoW1 W:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit

Structural contacts of domain e1rcoK2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rcoO1 K:X,Y,Z->O:x,y,z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e1rcoO2 K:X,Y,Z->O:x,y,z TIM barrels Interaction Interface Pymol
e1rcoM1 K:X,Y,Z->M:x,y,z RuBisCO, small subunit Interaction Interface Pymol
e1rcoE2 K:x,y,z->E:X,Y,Z TIM barrels Interaction Interface Pymol
e1rcoH1 K:x,y,z->H:X,Y,Z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e1rcoL1 K:X-1/2,-Y+1/2,-Z->L:x,y,z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e1rcoL2 K:X-1/2,-Y+1/2,-Z->L:x,y,z TIM barrels Interaction Interface Pymol