Domain ID e1rcoL1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: RuBisCO, large subunit, small (N-terminal) domain
  • T: RuBisCO, large subunit, small (N-terminal) domain
  • F: RuBisCO_large_N
UID: 000065079
Type: Automatic domain
Parent: e5rubA1
Range: L:11-147
Ligands: XDP
PDB: 1rco
PDB Description: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
UniProt: P00875
Species: Spinacia oleracea

Structure of domain e1rcoL1

Domains in the same chain:

e1rcoL1 L:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoL2 L:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e1rcoB1 B:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoB2 B:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoC1 C:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoE1 E:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoE2 E:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoF1 F:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoH1 H:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoH2 H:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoI1 I:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoK1 K:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoK2 K:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoL1 L:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoL2 L:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoM1 M:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoO1 O:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoO2 O:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoP1 P:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoR1 R:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoR2 R:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoS1 S:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoT1 T:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e1rcoV1 V:11-147 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e1rcoV2 V:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e1rcoW1 W:1-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit

Structural contacts of domain e1rcoL1 of H-group "RuBisCO, large subunit, small (N-terminal) domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rcoB2 L:x,y,z->B:X,Y,Z TIM barrels Interaction Interface Pymol
e1rcoK2 L:x,y,z->K:X-1/2,-Y+1/2,-Z TIM barrels Interaction Interface Pymol
e1rcoO2 L:x,y,z->O:X-1/2,-Y+1/2,-Z+1 TIM barrels Interaction Interface Pymol