| UID: | 001168778 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2hhvA2 |
| Range: | A:211-450 |
| Ligands: | D3T SO4 |
| PDB: | 1tkd |
| PDB Description: | DNA POLYMERASE |
| UniProt: | P00581 |
| Species: | Enterobacteria phage T7 |
Structure of domain e1tkdA6
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e1tkdA6 of H-group ""fingers" domain in bacteriophage RB69-like DNA polymerase I":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1tkdB1 | A:X,Y,Z->B:x,y,z | Thioredoxin-like | Interaction Interface Pymol |
| e1tkdA6 | A:x,y,z->A:X,Y,Z-1 | "fingers" domain in bacteriophage RB69-like DNA polymerase I | Interaction Interface Pymol |
| e1tkdA6 | A:X,Y,Z-1->A:x,y,z | "fingers" domain in bacteriophage RB69-like DNA polymerase I | Interaction Interface Pymol |
| e1tkdA1 | A:x,y,z->A:X-1/2,-Y+3/2,-Z+2 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I | Interaction Interface Pymol |
| e1tkdA7 | A:X-1/2,-Y+3/2,-Z+2->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
| e1tkdA7 | A:X-1/2,-Y+3/2,-Z+1->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
