Domain ID e1tkdA8

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_A
UID: 001168780
Type: Automatic domain
Parent: e2hhvA3
Range: A:451-478,A:592-704
Ligands: D3T MG
PDB: 1tkd
PDB Description: DNA POLYMERASE
UniProt: P00581
Species: Enterobacteria phage T7

Structure of domain e1tkdA8

Structural contacts of domain e1tkdA8 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tkdA1 A:x,y,z->A:X,Y,Z-1 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1tkdA7 A:x,y,z->A:X,Y,Z-1 Ribonuclease H-like Interaction Interface Pymol
e1tkdA7 A:x,y,z->A:-X+1,-Y+2,Z Ribonuclease H-like Interaction Interface Pymol
e1tkdA7 A:-X+1,-Y+2,Z->A:x,y,z Ribonuclease H-like Interaction Interface Pymol