Domain ID e1vqqA4

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  • A: a+b three layers
  • X: Profilin-like
  • H: a+b domain in beta-lactamase/transpeptidase-like proteins
  • T: a+b domain in beta-lactamase/transpeptidase-like proteins
  • F: Transpeptidase
UID: 000006901
Type: Manual and representative domain
Range: A:328-399,A:526-668
PDB: 1vqq
PDB Description: PENICILLIN-BINDING PROTEIN MECA, LOW-AFFINITY
UniProt: Q2PF50
Species: Staphylococcus aureus

Structure of domain e1vqqA4

Domains in the same chain:

e1vqqA3 A:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqA5 A:139-167,A:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqA4 A:328-399,A:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqA1 A:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e1vqqA3 A:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqA5 A:139-167,A:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqA4 A:328-399,A:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqA1 A:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1vqqB5 B:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqB3 B:139-167,B:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqB4 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqB2 B:328-399,B:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqB1 B:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e1vqqA4 of H-group "a+b domain in beta-lactamase/transpeptidase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vqqB2 A:X,Y,Z->B:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e1vqqB3 A:X,Y,Z->B:x,y,z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e1vqqB2 A:X-1,Y,Z->B:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e1vqqB1 A:X-1,Y,Z->B:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e1vqqB3 A:x,y,z->B:-X,Y-1/2,-Z+1/2 Penicillin binding protein dimerisation domain Interaction Interface Pymol
e1vqqB5 A:-X+1/2,-Y+1,Z-1/2->B:x,y,z NTF2-like Interaction Interface Pymol
e1vqqA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol