Domain ID e1vqqB4

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  • A: a+b two layers
  • X: ClpS-like
  • H: Penicillin binding protein ClpS-like domain
  • T: Penicillin binding protein ClpS-like domain
  • F: Unmapped domains
UID: 001396124
Type: Automatic domain
Parent: e1vqqA6
Range: B:168-238
Ligands: CD CL
PDB: 1vqq
PDB Description: PENICILLIN-BINDING PROTEIN MECA, LOW-AFFINITY
UniProt: Q2PF50
Species: Staphylococcus aureus

Structure of domain e1vqqB4

Domains in the same chain:

e1vqqB5 B:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqB3 B:139-167,B:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqB4 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqB2 B:328-399,B:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqB1 B:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e1vqqA3 A:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqA5 A:139-167,A:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqA4 A:328-399,A:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqA1 A:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1vqqB5 B:27-138 Cystatin-like NTF2-like NTF2-like
e1vqqB3 B:139-167,B:239-327 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1vqqB4 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1vqqB2 B:328-399,B:526-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1vqqB1 B:400-525 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e1vqqB4 of H-group "Penicillin binding protein ClpS-like domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vqqA5 B:x,y,z->A:X,Y,Z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e1vqqA3 B:x,y,z->A:X,Y,Z NTF2-like Interaction Interface Pymol
e1vqqA1 B:-X,Y-1/2,-Z+1/2->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e1vqqA3 B:x,y,z->A:X-1/2,-Y+1/2,-Z NTF2-like Interaction Interface Pymol