Domain ID e1vs5E1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 000070033
Type: Automatic domain
Parent: e1pkpA1
Range: E:9-76
PDB: 1vs5
PDB Description:
Species:

Structure of domain e1vs5E1

Domains in the same chain:

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e1vs5E1 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vs5E2 E:78-147 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e1vs5C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1vs5C1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1vs5E1 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vs5E2 E:78-147 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1vs5F1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1vs5G1 G:11-146 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1vs5H1 H:3-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1vs5H2 H:66-128 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1vs5J1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1vs5K1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vs5L1 L:1-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vs5N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1vs5O1 O:2-86 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1vs5P1 P:1-78 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1vs5R1 R:19-73 HTH HTH tri-helical
e1vs5T1 T:4-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1vs5E1 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vs5C1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol