Domain ID e1vvsG1

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  • A: a+b two layers
  • X: Ribosomal protein L5
  • H: Ribosomal protein L5
  • T: Ribosomal protein L5
  • F: Ribosomal_L5,Ribosomal_L5_C
UID: 001318912
Type: Automatic domain
Parent: e1iq4A1
Range: G:2-182
PDB: 1vvs
PDB Description:
Hsap BLAST neighbor: P62913
Species:

Structure of domain e1vvsG1

Domains in the same chain:

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e1vvsG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5

Domains in the same PDB:

e1vvs01 0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vvs11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vvs21 2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vvs31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vvs41 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e1vvs51 5:2-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vvs71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vvs81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vvs91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vvsD2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vvsD1 D:127-273 SH3 SH3 SH3
e1vvsF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vvsG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vvsH2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vvsH1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vvsI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vvsI2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e1vvsN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vvsO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vvsR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vvsU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e1vvsV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vvsW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vvsX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vvsY1 Y:2-103 SH3 SH3 SH3
e1vvsZ1 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vvsZ2 Z:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vvsG1 of H-group "Ribosomal protein L5":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vvs41 G:X,Y,Z->4:x,y,z Ribosomal protein L31p Interaction Interface Pymol