ECOD: domain e1y8rA2

Domain ID e1y8rA2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: Activating enzymes of the ubiquitin-like proteins
F: ThiF

UID:	001224316
Type:	Automatic domain
Parent:	e1yovA3
Range:	A:9-179,A:203-345
Ligands:	ATP
PDB:	1y8r
PDB Description:	Ubiquitin-like 1 activating enzyme E1A
UniProt:	Q9UBE0
Hsap BLAST neighbor:	Q9UBE0
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1y8rA2	A:9-179,A:203-345	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins

Domains in the same PDB:

e1y8rA2	A:9-179,A:203-345	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e1y8rB1	B:4-167,B:383-444	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e1y8rB3	B:168-218,B:240-382	Catalytic cysteine domain in ubiquitin-activating enzyme	Catalytic cysteine domain in ubiquitin-activating enzyme	Catalytic cysteine domain in ubiquitin-activating enzyme
e1y8rB2	B:445-550	beta-Grasp	E2-binding domain of E1	E2-binding domain of E1
e1y8rC1	C:21-92	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1y8rD1	D:9-177,D:204-345	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e1y8rE2	E:4-167,E:383-444	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e1y8rE3	E:168-218,E:240-382	Catalytic cysteine domain in ubiquitin-activating enzyme	Catalytic cysteine domain in ubiquitin-activating enzyme	Catalytic cysteine domain in ubiquitin-activating enzyme
e1y8rE1	E:445-550	beta-Grasp	E2-binding domain of E1	E2-binding domain of E1
e1y8rF1	F:21-92	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e1y8rA2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1y8rB3	A:X,Y,Z->B:x,y,z	Catalytic cysteine domain in ubiquitin-activating enzyme	Interaction Interface Pymol
e1y8rB1	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e1y8rB1	A:X-1/2,-Y+1/2,-Z+1->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e1y8rF1	A:X,Y,Z-1->F:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1y8rD1	A:X-1/2,-Y+1/2,-Z->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e1y8rE2	A:X,Y,Z->E:x,y,z	Rossmann-related	Interaction Interface Pymol