| UID: | 000067697 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1bdfA1 |
| Range: | A:6-49,A:173-227 |
| PDB: | 1ynn |
| PDB Description: | DNA-directed RNA polymerase alpha chain |
| UniProt: | Q9KWU8 |
| Species: | Thermus aquaticus |
Structure of domain e1ynnA1
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e1ynnA1 of H-group "RBP11-like subunits of RNA polymerase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ynnC9 | A:X,Y,Z->C:x,y,z | RIFT-related | Interaction Interface Pymol |
| e1ynnB1 | A:X,Y,Z->B:x,y,z | RBP11-like subunits of RNA polymerase | Interaction Interface Pymol |
| e1ynnB2 | A:X,Y,Z->B:x,y,z | Insert subdomain of RNA polymerase alpha subunit | Interaction Interface Pymol |
| e1ynnD7 | A:x,y,z->D:-Y+1/2,X-1/2,Z+1/4 | alpha/beta-Hammerhead/Barrel-sandwich hybrid | Interaction Interface Pymol |
| e1ynnC5 | A:x,y,z->C:-X+1/2,Y-1/2,-Z+1/4 | insertion domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e1ynnD5 | A:X,Y,Z->D:x,y,z | first helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
