Domain ID e1yq2F1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Galactose-binding domain-like
  • T: Galactose-binding domain-like
  • F: Glyco_hydro_2_N
UID: 000030521
Type: Automatic domain
Parent: e1jz8A1
Range: F:9-219
Ligands: NA PEG
PDB: 1yq2
PDB Description: beta-galactosidase
UniProt: Q8KRF6
Species: Arthrobacter sp. C2-2

Structure of domain e1yq2F1

Domains in the same chain:

Download Pymol

e1yq2F1 F:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2F3 F:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2F5 F:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2F2 F:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2F4 F:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e1yq2A1 A:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2A3 A:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2A5 A:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2A2 A:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2A4 A:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1yq2B1 B:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2B3 B:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2B5 B:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2B2 B:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2B4 B:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1yq2C1 C:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2C3 C:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2C5 C:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2C2 C:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2C4 C:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1yq2D1 D:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2D3 D:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2D5 D:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2D2 D:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2D4 D:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1yq2E1 E:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2E3 E:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2E5 E:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2E2 E:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2E4 E:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1yq2F1 F:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1yq2F3 F:220-312 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2F5 F:313-609 TIM beta/alpha-barrel TIM barrels TIM barrels
e1yq2F2 F:610-721 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1yq2F4 F:722-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e1yq2F1 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yq2A4 F:x,y,z->A:X,Y,Z supersandwich Interaction Interface Pymol