ECOD: domain e2afiE1

Domain ID e2afiE1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Fer4_NifH

UID:	000287154
Type:	Automatic domain
Parent:	e2afhE1
Range:	E:1-271
Ligands:	ADP MG SF4
PDB:	2afi
PDB Description:	Nitrogenase iron protein 1
UniProt:	P00459
Species:	Azotobacter vinelandii

Domains in the same chain:

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e2afiE1	E:1-271	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2afiA3	A:5-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiA1	A:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiA2	A:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiB3	B:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiB1	B:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiB2	B:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiC1	C:5-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiC2	C:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiC3	C:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiD3	D:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiD2	D:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiD1	D:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiE1	E:1-271	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiF1	F:1-275	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiG1	G:1-263	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiH1	H:2-270	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiI2	I:5-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiI3	I:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiI1	I:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiJ1	J:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiJ3	J:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiJ2	J:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiK2	K:5-210	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiK1	K:211-331	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiK3	K:332-480	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiL2	L:2-213	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiL3	L:214-349	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiL1	L:350-523	Flavodoxin-like	Class I glutamine amidotransferase-like	Chelatase-like
e2afiM1	M:4-271	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiN1	N:4-273	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiO1	O:2-263	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2afiP1	P:6-272	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2afiE1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2afiF1	E:X,Y,Z->F:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afiF1	E:x,y,z->B:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2afiH1	E:x,y,z->H:X-1,Y+1,Z	P-loop domains-related	Interaction Interface Pymol
e2afiH1	E:X,Y-1,Z->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afiH1	E:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2afiM1	E:X,Y-1,Z->M:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2afiM1	E:x,y,z->D:X-1,Y+1,Z	P-loop domains-related	Interaction Interface Pymol
e2afiG1	E:X,Y-1,Z->G:x,y,z	P-loop domains-related	Interaction Interface Pymol