Domain ID e2ba1D1

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  • A: a+b two layers
  • X: Ribonuclease PH domain 2-like
  • H: Ribonuclease PH domain 2
  • T: Ribonuclease PH domain 2
  • F: RNase_PH_C
UID: 000069805
Type: Automatic domain
Parent: e2je6B1
Range: D:154-242
PDB: 2ba1
PDB Description: Archaeal exosome complex exonuclease RRP41
UniProt: O29757
Species: Archaeoglobus fulgidus

Structure of domain e2ba1D1

Domains in the same chain:

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e2ba1D2 D:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1D1 D:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2

Domains in the same PDB:

e2ba1A2 A:1-56 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba1A1 A:57-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba1B2 B:1-56 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba1B1 B:57-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba1C2 C:1-56 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2ba1C1 C:57-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2ba1D2 D:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1D1 D:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba1E2 E:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1E1 E:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba1F2 F:10-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1F1 F:154-242 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba1G2 G:3-178 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1G1 G:179-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba1H2 H:3-178 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1H1 H:179-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e2ba1I2 I:3-178 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2ba1I1 I:179-257 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2

Structural contacts of domain e2ba1D1 of H-group "Ribonuclease PH domain 2":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ba1G1 D:X,Y,Z->G:x,y,z Ribonuclease PH domain 2 Interaction Interface Pymol
e2ba1G2 D:X,Y,Z->G:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2ba1A2 D:x,y,z->A:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2ba1E1 D:-Y,X,Z-1/4->E:x,y,z Ribonuclease PH domain 2 Interaction Interface Pymol
e2ba1B2 D:-Y,X,Z-1/4->B:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol