ECOD: domain e2ba1E2

Domain ID e2ba1E2

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: RNase_PH

UID:	000071441
Type:	Automatic domain
Parent:	e2je6B2
Range:	E:10-153
PDB:	2ba1
PDB Description:	Archaeal exosome complex exonuclease RRP41
UniProt:	O29757
Hsap BLAST neighbor:	Q9NPD3
Species:	Archaeoglobus fulgidus

Domains in the same chain:

Download Pymol

e2ba1E2	E:10-153	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1E1	E:154-242	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2

Domains in the same PDB:

e2ba1A2	A:1-56	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e2ba1A1	A:57-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ba1B2	B:1-56	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e2ba1B1	B:57-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ba1C2	C:1-56	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e2ba1C1	C:57-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ba1D2	D:10-153	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1D1	D:154-242	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2ba1E2	E:10-153	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1E1	E:154-242	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2ba1F2	F:10-153	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1F1	F:154-242	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2ba1G2	G:3-178	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1G1	G:179-257	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2ba1H2	H:3-178	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1H1	H:179-257	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2ba1I2	I:3-178	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2ba1I1	I:179-257	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2

Structural contacts of domain e2ba1E2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ba1H2	E:X,Y,Z->H:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2ba1H1	E:X,Y,Z->H:x,y,z	Ribonuclease PH domain 2	Interaction Interface Pymol
e2ba1G2	E:X,Y,Z->G:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2ba1G1	E:X,Y,Z->G:x,y,z	Ribonuclease PH domain 2	Interaction Interface Pymol
e2ba1B1	E:x,y,z->B:X,Y,Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2ba1B2	E:x,y,z->B:X,Y,Z	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Interaction Interface Pymol
e2ba1D2	E:x,y,z->D:-Y,X,Z-1/4	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2ba1C1	E:x,y,z->C:X,Y,Z	Nucleic acid-binding proteins	Interaction Interface Pymol