| UID: | 000089246 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1v54F1 |
| Range: | F:1-98 |
| Ligands: | PEK ZN |
| PDB: | 2dyr |
| PDB Description: | CYTOCHROME C OXIDASE POLYPEPTIDE VB |
| UniProt: | P00428 |
| Hsap BLAST neighbor: | P10606 |
| Species: | Bos taurus |
Structure of domain e2dyrF1
Domains in the same chain:
| e2dyrF1 | F:1-98 | Rubredoxin-like | Rubredoxin-related | Cytochrome c oxidase Subunit F |
Domains in the same PDB:
Structural contacts of domain e2dyrF1 of H-group "Rubredoxin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2dyrA1 | F:x,y,z->A:X,Y,Z | Cytochrome c oxidase subunit I-like | Interaction Interface Pymol |
| e2dyrC1 | F:x,y,z->C:X,Y,Z | Cytochrome c oxidase subunit III-like | Interaction Interface Pymol |
| e2dyrE1 | F:x,y,z->E:X,Y,Z | Cytochrome c oxidase subunit E | Interaction Interface Pymol |
| e2dyrJ1 | F:X,Y,Z->J:x,y,z | Mitochondrial cytochrome c oxidase subunit VIIa | Interaction Interface Pymol |
| e2dyrD1 | F:x,y,z->D:X,Y,Z | Mitochondrial cytochrome c oxidase subunit IV | Interaction Interface Pymol |
| e2dyrS1 | F:X,Y,Z->S:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e2dyrD1 | F:-X+1/2,-Y+3,Z-1/2->D:x,y,z | Mitochondrial cytochrome c oxidase subunit IV | Interaction Interface Pymol |
| e2dyrG1 | F:X,Y,Z->G:x,y,z | Mitochondrial cytochrome c oxidase subunit VIa | Interaction Interface Pymol |
| e2dyrT1 | F:X,Y,Z->T:x,y,z | Mitochondrial cytochrome c oxidase subunit VIa | Interaction Interface Pymol |
| e2dyrB1 | F:-X+1/2,-Y+3,Z-1/2->B:x,y,z | Cupredoxin-related | Interaction Interface Pymol |
