ECOD: domain e2f00A5

Domain ID e2f00A5

A: a/b three-layered sandwiches
X: MurD-like peptide ligases, peptide-binding domain
H: MurD-like peptide ligases, peptide-binding domain
T: MurD-like peptide ligases, peptide-binding domain
F: Mur_ligase_C

UID:	001254263
Type:	Automatic domain
Parent:	e1e8cA2
Range:	A:323-483
PDB:	2f00
PDB Description:	UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE
UniProt:	P17952
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e2f00A5

Domains in the same chain:

Download Pymol

e2f00A6	A:1-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2f00A4	A:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2f00A5	A:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e2f00A6	A:1-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2f00A4	A:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2f00A5	A:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain
e2f00B6	B:1-107	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2f00B4	B:108-322	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2f00B5	B:323-483	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e2f00A5 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2f00B4	A:X,Y-1,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2f00B4	A:-X,Y-1/2,-Z+1/2->B:x,y,z	P-loop domains-related	Interaction Interface Pymol