Domain ID e2gh8C3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: Capsid protein protrusion (P) domain
  • T: Capsid protein protrusion (P) domain
  • F: Unmapped domains
UID: 001696071
Type: Automatic domain
Parent: e2gh8A3
Range: C:420-589
PDB: 2gh8
PDB Description: Capsid protein
UniProt: P36285
Species:

Structure of domain e2gh8C3

Domains in the same chain:

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e2gh8C1 C:160-359 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2gh8C2 C:360-419,C:590-703 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8C3 C:420-589 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain

Domains in the same PDB:

e2gh8A1 A:160-359 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2gh8A2 A:360-419,A:590-703 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8A3 A:420-589 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8B2 B:163-359 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2gh8B1 B:360-419,B:590-703 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8B3 B:420-589 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8C1 C:160-359 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2gh8C2 C:360-419,C:590-703 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain
e2gh8C3 C:420-589 cradle loop barrel Capsid protein protrusion (P) domain Capsid protein protrusion (P) domain

Structural contacts of domain e2gh8C3 of H-group "Capsid protein protrusion (P) domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gh8C2 C:x,y,z->C:-X,-Y,Z Capsid protein protrusion (P) domain Interaction Interface Pymol
e2gh8C3 C:x,y,z->C:-X,-Y,Z Capsid protein protrusion (P) domain Interaction Interface Pymol
e2gh8C2 C:-X,-Y,Z->C:x,y,z Capsid protein protrusion (P) domain Interaction Interface Pymol
e2gh8C3 C:-X,-Y,Z->C:x,y,z Capsid protein protrusion (P) domain Interaction Interface Pymol
e2gh8B1 C:x,y,z->B:X,Y,Z Capsid protein protrusion (P) domain Interaction Interface Pymol