ECOD: domain e2gy9N1

Domain ID e2gy9N1

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: Ribosomal_S14

UID:	001000535
Type:	Automatic domain
Parent:	e2qalN1
Range:	N:40-100
PDB:	2gy9
PDB Description:
Hsap BLAST neighbor:	O60783
Species:

Domain
In chain context
In PDB context

Structure of domain e2gy9N1

Domains in the same chain:

Download Pymol

e2gy9N1	N:40-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Domains in the same PDB:

e2gy9C2	C:1-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e2gy9C1	C:106-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e2gy9E1	E:9-77	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e2gy9E2	E:78-156	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2gy9F1	F:1-95	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e2gy9G1	G:19-155	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e2gy9H1	H:3-65	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e2gy9H2	H:66-128	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e2gy9J1	J:5-100	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e2gy9K1	K:12-127	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2gy9L1	L:22-118	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2gy9N1	N:40-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e2gy9O1	O:2-87	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e2gy9R1	R:6-74	HTH	HTH	tri-helical

Structural contacts of domain e2gy9N1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gy9C2	N:X,Y,Z->C:x,y,z	KH-domains	Interaction Interface Pymol