Domain ID e2gy9E1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 000306500
Type: Automatic domain
Parent: e1pkpA1
Range: E:9-77
PDB: 2gy9
PDB Description:
Species:

Structure of domain e2gy9E1

Domains in the same chain:

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e2gy9E1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2gy9E2 E:78-156 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2gy9C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2gy9C1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2gy9E1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2gy9E2 E:78-156 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2gy9F1 F:1-95 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2gy9G1 G:19-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2gy9H1 H:3-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2gy9H2 H:66-128 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2gy9J1 J:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2gy9K1 K:12-127 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2gy9L1 L:22-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2gy9N1 N:40-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2gy9O1 O:2-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2gy9R1 R:6-74 HTH HTH tri-helical

Structural contacts of domain e2gy9E1 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gy9C1 E:X,Y,Z->C:x,y,z Ribosomal protein S3-C Interaction Interface Pymol