Domain ID e2panB2

Download files:
  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 000334044
Type: Automatic domain
Parent: e1pvdA2
Range: B:2-184
Ligands: FAD
PDB: 2pan
PDB Description: Glyoxylate carboligase
UniProt: P0AEP7
Hsap BLAST neighbor: A1L0T0
Species: Escherichia coli

Structure of domain e2panB2

Domains in the same chain:

e2panB2 B:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panB5 B:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panB4 B:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2panA4 A:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panA6 A:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panA5 A:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panB2 B:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panB5 B:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panB4 B:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panC2 C:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panC5 C:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panC4 C:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panD2 D:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panD5 D:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panD4 D:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panE2 E:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panE5 E:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panE4 E:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panF2 F:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panF5 F:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panF4 F:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2panB2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2panB5 B:x,y,z->B:-Y,-X,-Z-1/2 Rossmann-related Interaction Interface Pymol
e2panB2 B:x,y,z->B:-Y,-X,-Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panB4 B:x,y,z->B:-Y,-X,-Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panB4 B:-Y,-X,-Z-1/2->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panB5 B:-Y,-X,-Z-1/2->B:x,y,z Rossmann-related Interaction Interface Pymol
e2panB2 B:-Y,-X,-Z-1/2->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panA4 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panA6 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2panA4 B:x,y,z->A:-Y,-X,-Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol