Domain ID e2panD4

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 001185913
Type: Automatic domain
Parent: e1pvdA3
Range: D:363-593
Ligands: DTT FAD MG TDP
PDB: 2pan
PDB Description: Glyoxylate carboligase
UniProt: P0AEP7
Species: Escherichia coli

Structure of domain e2panD4

Domains in the same chain:

e2panD2 D:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panD5 D:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panD4 D:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2panA4 A:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panA6 A:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panA5 A:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panB2 B:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panB5 B:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panB4 B:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panC2 C:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panC5 C:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panC4 C:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panD2 D:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panD5 D:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panD4 D:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panE2 E:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panE5 E:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panE4 E:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panF2 F:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2panF5 F:185-362 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2panF4 F:363-593 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2panD4 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2panF2 D:X,Y,Z->F:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panF4 D:X,Y,Z->F:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panC4 D:-Y+1/2,X+1/2,Z+1/4->C:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panA5 D:-X-1/2,Y-1/2,-Z-3/4->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2panA5 D:-Y+1/2,X+1/2,Z+1/4->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol