ECOD: domain e2panF5

Domain ID e2panF5

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: DHS-like NAD/FAD-binding domain
F: TPP_enzyme_M

UID:	001185923
Type:	Automatic domain
Parent:	e2ez9A1
Range:	F:185-362
Ligands:	DTT FAD
PDB:	2pan
PDB Description:	Glyoxylate carboligase
UniProt:	P0AEP7
Hsap BLAST neighbor:	Q9UJ83
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e2panF5

Domains in the same chain:

Download Pymol

e2panF2	F:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panF5	F:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panF4	F:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

Structural contacts of domain e2panF5 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2panD2	F:x,y,z->D:X,Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2panE2	F:x,y,z->E:X,Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2panE4	F:x,y,z->E:-Y-1/2,X+1/2,Z+1/4	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol

e2panA4	A:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panA6	A:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panA5	A:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panB2	B:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panB5	B:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panB4	B:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panC2	C:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panC5	C:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panC4	C:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panD2	D:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panD5	D:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panD4	D:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panE2	E:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panE5	E:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panE4	E:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panF2	F:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2panF5	F:185-362	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2panF4	F:363-593	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)