ECOD: domain e2q2eA3

Domain ID e2q2eA3

A: alpha arrays
X: HTH
H: HTH domain in DNA topoisomerase IV alpha subunit
T: HTH domain in DNA topoisomerase IV alpha subunit
F: TP6A_N

UID:	001394772
Type:	Automatic domain
Parent:	e1d3yA2
Range:	A:15-43,A:68-145
PDB:	2q2e
PDB Description:	Type II DNA topoisomerase VI subunit A
UniProt:	Q8PUB7
Species:	Methanosarcina mazei

Domain
In chain context
In PDB context

Structure of domain e2q2eA3

Domains in the same chain:

Download Pymol

e2q2eA3	A:15-43,A:68-145	HTH	HTH domain in DNA topoisomerase IV alpha subunit	HTH domain in DNA topoisomerase IV alpha subunit
e2q2eA2	A:145-192	all-beta domain in DNA topoisomerase IV alpha subunit	all-beta domain in DNA topoisomerase IV alpha subunit	all-beta domain in DNA topoisomerase IV alpha subunit
e2q2eA1	A:193-367	HAD domain-like	HAD domain-related	Toprim domain

Domains in the same PDB:

e2q2eA3	A:15-43,A:68-145	HTH	HTH domain in DNA topoisomerase IV alpha subunit	HTH domain in DNA topoisomerase IV alpha subunit
e2q2eA2	A:145-192	all-beta domain in DNA topoisomerase IV alpha subunit	all-beta domain in DNA topoisomerase IV alpha subunit	all-beta domain in DNA topoisomerase IV alpha subunit
e2q2eA1	A:193-367	HAD domain-like	HAD domain-related	Toprim domain
e2q2eB1	B:11-233	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e2q2eB2	B:234-309	HhH/H2TH	H2TH	H2TH
e2q2eB3	B:310-493	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2q2eB4	B:494-613	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2q2eA3 of H-group "HTH domain in DNA topoisomerase IV alpha subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2q2eA1	A:x,y,z->A:-Y+1,-X+1,-Z+4/3	HAD domain-related	Interaction Interface Pymol
e2q2eA1	A:-Y+1,-X+1,-Z+4/3->A:x,y,z	HAD domain-related	Interaction Interface Pymol
e2q2eB3	A:X,Y,Z->B:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2q2eB4	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2q2eB4	A:X-Y+1,-Y+2,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol