Domain ID e2q2eB4

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Top6b_C
UID: 000223775
Type: Manual and representative domain
Range: B:494-613
PDB: 2q2e
PDB Description: Type 2 DNA topoisomerase 6 subunit B
UniProt: Q8PUB8
Species: Methanosarcina mazei

Structure of domain e2q2eB4

Domains in the same chain:

Download Pymol

e2q2eB1 B:11-233 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e2q2eB2 B:234-309 HhH/H2TH H2TH H2TH
e2q2eB3 B:310-493 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2q2eB4 B:494-613 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2q2eA3 A:15-43,A:68-145 HTH HTH domain in DNA topoisomerase IV alpha subunit HTH domain in DNA topoisomerase IV alpha subunit
e2q2eA2 A:145-192 all-beta domain in DNA topoisomerase IV alpha subunit all-beta domain in DNA topoisomerase IV alpha subunit all-beta domain in DNA topoisomerase IV alpha subunit
e2q2eA1 A:193-367 HAD domain-like HAD domain-related Toprim domain
e2q2eB1 B:11-233 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e2q2eB2 B:234-309 HhH/H2TH H2TH H2TH
e2q2eB3 B:310-493 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2q2eB4 B:494-613 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2q2eB4 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2q2eB4 B:x,y,z->B:X-Y+1,-Y+2,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e2q2eB4 B:X-Y+1,-Y+2,-Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2q2eA3 B:x,y,z->A:X,Y,Z HTH domain in DNA topoisomerase IV alpha subunit Interaction Interface Pymol
e2q2eA3 B:x,y,z->A:X-Y+1,-Y+2,-Z+1 HTH domain in DNA topoisomerase IV alpha subunit Interaction Interface Pymol
e2q2eB4 B:x,y,z->B:-X+1,-Y+2,Z Immunoglobulin-related Interaction Interface Pymol
e2q2eB4 B:-X+1,-Y+2,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol