Domain ID e2uxdM1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: H2TH
  • T: H2TH
  • F: Ribosomal_S13
UID: 001552907
Type: Automatic domain
Parent: e4v4vAM1
Range: M:2-126
PDB: 2uxd
PDB Description: RIBOSOMAL PROTEIN S13
UniProt: P80377
Hsap BLAST neighbor: P62269
Species:

Structure of domain e2uxdM1

Domains in the same chain:

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e2uxdM1 M:2-126 HhH/H2TH H2TH H2TH

Domains in the same PDB:

e2uxdB1 B:7-127,B:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e2uxdC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2uxdC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2uxdD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e2uxdE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2uxdE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uxdF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2uxdG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2uxdH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2uxdH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2uxdI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uxdJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2uxdK1 K:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2uxdL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uxdM1 M:2-126 HhH/H2TH H2TH H2TH
e2uxdN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2uxdO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2uxdP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2uxdQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uxdR1 R:19-88 HTH HTH tri-helical
e2uxdS1 S:2-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e2uxdT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2uxdM1 of H-group "H2TH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2uxdS1 M:X,Y,Z->S:x,y,z Ribosomal protein S19 Interaction Interface Pymol
e2uxdI1 M:x,y,z->I:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol