ECOD: domain e2vbiA1

Domain ID e2vbiA1

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A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: DHS-like NAD/FAD-binding domain
F: TPP_enzyme_M

UID:	000167612
Type:	Automatic domain
Parent:	e2ez9A1
Range:	A:185-353
PDB:	2vbi
PDB Description:	PYRUVATE DECARBOXYLASE
UniProt:	Q8L388
Species:	Acetobacter pasteurianus

Domain
In chain context
In PDB context

Structure of domain e2vbiA1

Domains in the same chain:

e2vbiA2	A:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiA1	A:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiA3	A:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2vbiA2	A:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiA1	A:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiA3	A:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiB2	B:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiB1	B:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiB3	B:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiC2	C:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiC1	C:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiC3	C:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiD2	D:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiD1	D:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiD3	D:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiE2	E:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiE1	E:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiE3	E:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiF2	F:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiF1	F:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiF3	F:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiG2	G:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiG1	G:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiG3	G:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiH2	H:2-184	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e2vbiH1	H:185-353	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e2vbiH3	H:354-555	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2vbiA1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vbiB2	A:X,Y,Z->B:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2vbiD1	A:X,Y,Z->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e2vbiD2	A:X,Y,Z->D:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2vbiF2	A:X,Y,Z->F:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2vbiF3	A:X,Y,Z->F:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e2vbiG1	A:X,Y,Z->G:x,y,z	Rossmann-related	Interaction Interface Pymol