Domain ID e2vbiC2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 000339539
Type: Automatic domain
Parent: e1pvdA2
Range: C:2-184
Ligands: TPP
PDB: 2vbi
PDB Description: PYRUVATE DECARBOXYLASE
UniProt: Q8L388
Species: Acetobacter pasteurianus

Structure of domain e2vbiC2

Domains in the same chain:

e2vbiC2 C:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiC1 C:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiC3 C:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2vbiA2 A:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiA1 A:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiA3 A:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiB2 B:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiB1 B:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiB3 B:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiC2 C:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiC1 C:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiC3 C:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiD2 D:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiD1 D:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiD3 D:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiE2 E:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiE1 E:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiE3 E:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiF2 F:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiF1 F:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiF3 F:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiG2 G:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiG1 G:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiG3 G:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiH2 H:2-184 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vbiH1 H:185-353 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vbiH3 H:354-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2vbiC2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vbiD2 C:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vbiD1 C:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol
e2vbiD3 C:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vbiB2 C:x,y,z->B:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vbiB1 C:x,y,z->B:X,Y,Z Rossmann-related Interaction Interface Pymol
e2vbiA2 C:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vbiB1 C:x,y,z->B:-X,Y,-Z Rossmann-related Interaction Interface Pymol
e2vbiA3 C:-X-1/2,Y-1/2,-Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol