Domain ID e2vdhP1

Download files:
  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: RuBisCO, small subunit
  • T: RuBisCO, small subunit
  • F: RuBisCO_small
UID: 000351804
Type: Automatic domain
Parent: e1bwvS1
Range: P:1-140
Ligands: EDO
PDB: 2vdh
PDB Description: RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1
UniProt: P00873
Species: Chlamydomonas reinhardtii

Structure of domain e2vdhP1

Domains in the same chain:

e2vdhP1 P:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit

Domains in the same PDB:

e2vdhA1 A:11-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhA2 A:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhB1 B:8-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhB2 B:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhC1 C:9-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhC2 C:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhD1 D:11-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhD2 D:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhE1 E:11-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhE2 E:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhF1 F:9-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhF2 F:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhG1 G:9-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhG2 G:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhH1 H:11-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e2vdhH2 H:151-475 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vdhI1 I:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhJ1 J:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhK1 K:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhL1 L:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhM1 M:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhN1 N:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhO1 O:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e2vdhP1 P:1-140 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit

Structural contacts of domain e2vdhP1 of H-group "RuBisCO, small subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vdhH2 P:x,y,z->H:X,Y,Z TIM barrels Interaction Interface Pymol
e2vdhF2 P:x,y,z->F:X,Y,Z TIM barrels Interaction Interface Pymol
e2vdhJ1 P:x,y,z->J:X,Y,Z RuBisCO, small subunit Interaction Interface Pymol
e2vdhN1 P:x,y,z->N:X,Y,Z RuBisCO, small subunit Interaction Interface Pymol
e2vdhE1 P:x,y,z->E:X,Y,Z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e2vdhM1 P:x,y,z->M:-X,Y-1/2,-Z RuBisCO, small subunit Interaction Interface Pymol
e2vdhH1 P:x,y,z->H:-X,Y-1/2,-Z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e2vdhI1 P:x,y,z->I:X-1,Y,Z-1 RuBisCO, small subunit Interaction Interface Pymol