ECOD: domain e2vmfB2

Domain ID e2vmfB2

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Glyco_hydro_2

UID:	000033575
Type:	Automatic domain
Parent:	e1jz8A2
Range:	B:220-330
Ligands:	BR CL EDO
PDB:	2vmf
PDB Description:	BETA-MANNOSIDASE
UniProt:	Q8AAK6
Species:

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e2vmfA1	A:28-219	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vmfA2	A:220-330	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfA5	A:331-678	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vmfA4	A:679-783	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfA3	A:784-864	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB1	B:28-219	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vmfB2	B:220-330	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB5	B:331-678	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vmfB4	B:679-783	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB3	B:784-864	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vmfB2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vmfA2	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e2vmfA5	B:x,y,z->A:-X,Y-1/2,-Z	TIM barrels	Interaction Interface Pymol