Domain ID e2vmfB3

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Ig_mannosidase
UID: 000033579
Type: Automatic domain
Parent: e2je8A3
Range: B:784-864
Ligands: EDO
PDB: 2vmf
PDB Description: BETA-MANNOSIDASE
UniProt: Q8AAK6
Species:

Structure of domain e2vmfB3

Domains in the same chain:

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e2vmfB1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vmfB2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vmfB4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vmfA1 A:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vmfA2 A:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfA5 A:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vmfA4 A:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfA3 A:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vmfB2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vmfB4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vmfB3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vmfB3 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vmfA1 B:x,y,z->A:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e2vmfA3 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2vmfA5 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2vmfA2 B:-X+1,Y-1/2,-Z+1->A:x,y,z Immunoglobulin-related Interaction Interface Pymol