Domain ID e2wdhH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000361122
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 2wdh
PDB Description:
Species:

Structure of domain e2wdhH2

Domains in the same chain:

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e2wdhH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wdhH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e2wdhC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wdhC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wdhE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wdhE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wdhF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wdhG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wdhH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wdhH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wdhJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wdhK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wdhL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wdhN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wdhO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wdhP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wdhR1 R:19-88 HTH HTH tri-helical
e2wdhT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2wdhH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wdhE2 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2wdhL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol