Domain ID e2wdhE1

Download files:
  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 000361117
Type: Automatic domain
Parent: e1pkpA1
Range: E:5-73
Ligands: MG
PDB: 2wdh
PDB Description:
Species:

Structure of domain e2wdhE1

Domains in the same chain:

Download Pymol

e2wdhE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wdhE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2wdhC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wdhC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wdhE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wdhE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wdhF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wdhG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wdhH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wdhH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wdhJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wdhK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wdhL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wdhN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wdhO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wdhP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wdhR1 R:19-88 HTH HTH tri-helical
e2wdhT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2wdhE1 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wdhC1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol