ECOD: domain e2yiuA1

Domain ID e2yiuA1

A: alpha bundles
X: Transmembrane heme-binding four-helical bundle
H: Transmembrane heme-binding four-helical bundle
T: Transmembrane di-heme cytochromes
F: Cytochrome_B

UID:	000145082
Type:	Automatic domain
Parent:	e1ppjC2
Range:	A:3-284
Ligands:	HEM SMA
PDB:	2yiu
PDB Description:	CYTOCHROME B
UniProt:	P05418
Hsap BLAST neighbor:	P00156
Species:

Domains in the same chain:

Download Pymol

e2yiuA1	A:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuA3	A:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e2yiuA1	A:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuA3	A:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuB1	B:54-281	Cytochrome c-like	Cytochrome c	Cytochrome c
e2yiuC1	C:17-46	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2yiuC2	C:47-131	ISP domain	ISP domain	ISP domain
e2yiuC3	C:131-190	Trm112p-like	Trm112p-like	Trm112p-like
e2yiuD2	D:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuD3	D:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuE1	E:54-281	Cytochrome c-like	Cytochrome c	Cytochrome c
e2yiuF3	F:17-46	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2yiuF8	F:47-131	ISP domain	ISP domain	ISP domain
e2yiuF7	F:131-190	Trm112p-like	Trm112p-like	Trm112p-like

Structural contacts of domain e2yiuA1 of H-group "Transmembrane heme-binding four-helical bundle":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yiuB1	A:X,Y,Z->B:x,y,z	Cytochrome c	Interaction Interface Pymol
e2yiuD2	A:X,Y,Z->D:x,y,z	Transmembrane heme-binding four-helical bundle	Interaction Interface Pymol
e2yiuF8	A:X,Y,Z->F:x,y,z	ISP domain	Interaction Interface Pymol
e2yiuF3	A:X,Y,Z->F:x,y,z	iron-sulfur subunit (ISP) transmembrane anchor	Interaction Interface Pymol
e2yiuF7	A:X,Y,Z->F:x,y,z	Trm112p-like	Interaction Interface Pymol
e2yiuF7	A:X,Y,Z->C:x,y,z	Trm112p-like	Interaction Interface Pymol
e2yiuF7	A:X,Y,Z->C:x,y,z	Trm112p-like	Interaction Interface Pymol
e2yiuF7	A:x,y,z->C:-X,Y-1/2,-Z	Trm112p-like	Interaction Interface Pymol
e2yiuE1	A:x,y,z->E:-X,Y-1/2,-Z	Cytochrome c	Interaction Interface Pymol