ECOD: domain e2yiuD3

Domain ID e2yiuD3

A: alpha bundles
X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
F: Cytochrom_B_C

UID:	001225093
Type:	Automatic domain
Parent:	e1ppjC1
Range:	D:285-430
Ligands:	HEM SMA
PDB:	2yiu
PDB Description:	CYTOCHROME B
UniProt:	P05418
Hsap BLAST neighbor:	P00156
Species:

Domains in the same chain:

Download Pymol

e2yiuD2	D:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuD3	D:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e2yiuA1	A:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuA3	A:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuB1	B:54-281	Cytochrome c-like	Cytochrome c	Cytochrome c
e2yiuC1	C:17-46	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2yiuC2	C:47-131	ISP domain	ISP domain	ISP domain
e2yiuC3	C:131-190	Trm112p-like	Trm112p-like	Trm112p-like
e2yiuD2	D:3-284	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e2yiuD3	D:285-430	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuE1	E:54-281	Cytochrome c-like	Cytochrome c	Cytochrome c
e2yiuF3	F:17-46	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e2yiuF8	F:47-131	ISP domain	ISP domain	ISP domain
e2yiuF7	F:131-190	Trm112p-like	Trm112p-like	Trm112p-like

Structural contacts of domain e2yiuD3 of H-group "a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yiuE1	D:X,Y,Z->E:x,y,z	Cytochrome c	Interaction Interface Pymol
e2yiuE1	D:X,Y,Z->C:x,y,z	Cytochrome c	Interaction Interface Pymol
e2yiuE1	D:X,Y,Z->C:x,y,z	Cytochrome c	Interaction Interface Pymol
e2yiuB1	D:x,y,z->B:-X,Y-1/2,-Z	Cytochrome c	Interaction Interface Pymol