Domain ID e2yiuD2

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  • A: alpha bundles
  • X: Transmembrane heme-binding four-helical bundle
  • H: Transmembrane heme-binding four-helical bundle
  • T: Transmembrane di-heme cytochromes
  • F: Cytochrome_B
UID: 000447081
Type: Automatic domain
Parent: e1ppjC2
Range: D:3-284
Ligands: HEM SMA
PDB: 2yiu
PDB Description: CYTOCHROME B
UniProt: P05418
Hsap BLAST neighbor: P00156
Species:

Structure of domain e2yiuD2

Domains in the same chain:

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e2yiuD2 D:3-284 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e2yiuD3 D:285-430 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e2yiuA1 A:3-284 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e2yiuA3 A:285-430 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuB1 B:54-281 Cytochrome c-like Cytochrome c Cytochrome c
e2yiuC1 C:17-46 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e2yiuC2 C:47-131 ISP domain ISP domain ISP domain
e2yiuC3 C:131-190 Trm112p-like Trm112p-like Trm112p-like
e2yiuD2 D:3-284 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e2yiuD3 D:285-430 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2yiuE1 E:54-281 Cytochrome c-like Cytochrome c Cytochrome c
e2yiuF3 F:17-46 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e2yiuF8 F:47-131 ISP domain ISP domain ISP domain
e2yiuF7 F:131-190 Trm112p-like Trm112p-like Trm112p-like

Structural contacts of domain e2yiuD2 of H-group "Transmembrane heme-binding four-helical bundle":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yiuE1 D:X,Y,Z->E:x,y,z Cytochrome c Interaction Interface Pymol
e2yiuA1 D:x,y,z->A:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2yiuA1 D:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2yiuA1 D:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2yiuA1 D:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2yiuF8 D:X,Y,Z->F:x,y,z ISP domain Interaction Interface Pymol
e2yiuF3 D:X,Y,Z->F:x,y,z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e2yiuF3 D:x,y,z->C:-X,Y-1/2,-Z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e2yiuF3 D:x,y,z->C:-X,Y-1/2,-Z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol