Domain ID e2zkqh2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000341475
Type: Automatic domain
Parent: e1i6uA2
Range: h:68-130
PDB: 2zkq
PDB Description:
Hsap BLAST neighbor: P62244
Species:

Structure of domain e2zkqh2

Domains in the same chain:

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e2zkqh1 h:4-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2zkqh2 h:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e2zkqa1 a:4-311 beta-propeller-like beta-propeller 7-bladed
e2zkqc2 c:2-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2zkqc1 c:92-193 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2zkqe1 e:9-75 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2zkqe2 e:76-157 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2zkqg2 g:17-40,g:63-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2zkqh1 h:4-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2zkqh2 h:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2zkqj1 j:19-115 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2zkqk1 k:23-147 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2zkql2 l:26-140 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2zkqn1 n:6-54 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2zkqo1 o:1-85 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain

Structural contacts of domain e2zkqh2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zkqe2 h:X,Y,Z->e:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol