ECOD: domain e2zkqe1

Domain ID e2zkqe1

A: a+b two layers
X: dsRBD-like
H: dsRNA-binding domain-like
T: dsRNA-binding domain-like
F: Ribosomal_S5

UID:	000341471
Type:	Automatic domain
Parent:	e1pkpA1
Range:	e:9-75
PDB:	2zkq
PDB Description:
Hsap BLAST neighbor:	P15880
Species:

Domain
In chain context
In PDB context

Structure of domain e2zkqe1

Domains in the same chain:

Download Pymol

e2zkqe1	e:9-75	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e2zkqe2	e:76-157	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2zkqa1	a:4-311	beta-propeller-like	beta-propeller	7-bladed
e2zkqc2	c:2-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e2zkqc1	c:92-193	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e2zkqe1	e:9-75	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e2zkqe2	e:76-157	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2zkqg2	g:17-40,g:63-204	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e2zkqh1	h:4-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e2zkqh2	h:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e2zkqj1	j:19-115	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e2zkqk1	k:23-147	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2zkql2	l:26-140	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2zkqn1	n:6-54	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e2zkqo1	o:1-85	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain

Structural contacts of domain e2zkqe1 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zkqc1	e:X,Y,Z->c:x,y,z	Ribosomal protein S3-C	Interaction Interface Pymol