| UID: | 001487572 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2xueA1 |
| Range: | A:922-1047,A:1081-1243 |
| Ligands: | CL EDO NI OGA |
| PDB: | 3avr |
| PDB Description: | LYSINE-SPECIFIC DEMETHYLASE 6A |
| UniProt: | O15550 |
| Hsap BLAST neighbor: | O15550 |
| Species: | Homo sapiens |
Structure of domain e3avrA3
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3avrA3 of H-group "Double-stranded beta-helix":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3avrA1 | A:x,y,z->A:-X,Y-1/2,-Z-1/2 | C-terminal helical domain in Jumonji domain-containing histone demethylases | Interaction Interface Pymol |
| e3avrA3 | A:x,y,z->A:-X,Y-1/2,-Z-1/2 | Double-stranded beta-helix | Interaction Interface Pymol |
| e3avrA3 | A:-X,Y-1/2,-Z-1/2->A:x,y,z | Double-stranded beta-helix | Interaction Interface Pymol |
| e3avrA3 | A:x,y,z->A:-X-1/2,-Y,Z-1/2 | Double-stranded beta-helix | Interaction Interface Pymol |
| e3avrA2 | A:x,y,z->A:-X-1/2,-Y,Z-1/2 | LIM domain-like | Interaction Interface Pymol |
| e3avrA3 | A:-X-1/2,-Y,Z-1/2->A:x,y,z | Double-stranded beta-helix | Interaction Interface Pymol |
| e3avrA3 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | Double-stranded beta-helix | Interaction Interface Pymol |
| e3avrA3 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | Double-stranded beta-helix | Interaction Interface Pymol |
