ECOD: domain e3bbnR1

Domain ID e3bbnR1

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: Ribosomal_S18

UID:	000167933
Type:	Automatic domain
Parent:	e2uubR1
Range:	R:25-82
PDB:	3bbn
PDB Description:
Hsap BLAST neighbor:	Q9Y3D5
Species:

Domain
In chain context
In PDB context

Structure of domain e3bbnR1

Domains in the same chain:

Download Pymol

e3bbnR1	R:25-82	HTH	HTH	tri-helical

Domains in the same PDB:

e3bbnC1	C:118-217	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e3bbnE2	E:151-218	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e3bbnE1	E:219-308	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3bbnF1	F:62-168	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e3bbnG1	G:2-155	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e3bbnH1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e3bbnH2	H:67-134	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e3bbnJ1	J:99-197	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e3bbnK1	K:21-138	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3bbnL1	L:1-123	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bbnN1	N:2-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3bbnO1	O:2-86	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e3bbnP1	P:1-80	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e3bbnR1	R:25-82	HTH	HTH	tri-helical
e3bbnT1	T:80-181	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e3bbnR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bbnF1	R:X,Y,Z->F:x,y,z	Ribosomal protein S6	Interaction Interface Pymol
e3bbnK1	R:X,Y,Z->K:x,y,z	Ribonuclease H-like	Interaction Interface Pymol