Domain ID e3bbnE2

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 000167901
Type: Automatic domain
Parent: e1pkpA1
Range: E:151-218
PDB: 3bbn
PDB Description:
Hsap BLAST neighbor: P15880
Species:

Structure of domain e3bbnE2

Domains in the same chain:

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e3bbnE2 E:151-218 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3bbnE1 E:219-308 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3bbnC1 C:118-217 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3bbnE2 E:151-218 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3bbnE1 E:219-308 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3bbnF1 F:62-168 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3bbnG1 G:2-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3bbnH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3bbnH2 H:67-134 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3bbnJ1 J:99-197 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3bbnK1 K:21-138 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3bbnL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3bbnN1 N:2-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3bbnO1 O:2-86 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3bbnP1 P:1-80 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3bbnR1 R:25-82 HTH HTH tri-helical
e3bbnT1 T:80-181 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3bbnE2 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bbnC1 E:X,Y,Z->C:x,y,z Ribosomal protein S3-C Interaction Interface Pymol