Domain ID e3cqzL1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: DNA_RNApol_7kD
UID: 000088997
Type: Automatic domain
Parent: e1twfL1
Range: L:26-70
Ligands: ZN
PDB: 3cqz
PDB Description: DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4
UniProt: P40422
Hsap BLAST neighbor: P53803
Species: Saccharomyces cerevisiae

Structure of domain e3cqzL1

Domains in the same chain:

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e3cqzL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3cqzA9 A:6-304 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e3cqzA8 A:347-374,A:436-519 cradle loop barrel RIFT-related double psi
e3cqzA7 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e3cqzA6 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e3cqzA1 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e3cqzA5 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e3cqzA3 A:1060-1112,A:1331-1450 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e3cqzA4 A:1113-1141,A:1273-1330 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3cqzA2 A:1142-1272 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3cqzB4 B:20-69,B:89-134,B:164-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3cqzB3 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e3cqzB1 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e3cqzB7 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e3cqzB6 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e3cqzB2 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3cqzB5 B:1098-1099,B:1127-1222 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3cqzC3 C:3-41,C:173-267 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3cqzC4 C:42-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e3cqzE2 E:3-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e3cqzE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e3cqzF1 F:72-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e3cqzH2 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3cqzI1 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3cqzI2 I:50-122 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3cqzJ1 J:1-65 HTH RPB10 RPB10
e3cqzK1 K:2-114 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3cqzL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related