| UID: | 000364774 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3pnpA1 |
| Range: | D:4003-4253 |
| Ligands: | PO4 |
| PDB: | 3ddo |
| PDB Description: | URIDINE PHOSPHORYLASE |
| UniProt: | P0A1F6 |
| Hsap BLAST neighbor: | O95045 |
| Species: |
Structure of domain e3ddoD1
Domains in the same chain:
| e3ddoD1 | D:4003-4253 | Phosphorylase/hydrolase-like | Peptidyl-tRNA hydrolase-like | Peptidyl-tRNA hydrolase-like |
Domains in the same PDB:
Structural contacts of domain e3ddoD1 of H-group "Peptidyl-tRNA hydrolase-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ddoB1 | D:x,y,z->B:X,Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoC1 | D:x,y,z->C:X,Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoC1 | D:-X+1,Y-1/2,-Z+1/2->C:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoB1 | D:x,y,z->B:X-1/2,-Y+1/2,-Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoF1 | D:X,Y,Z->F:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoE1 | D:X,Y,Z->E:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoE1 | D:-X+1,Y-1/2,-Z+1/2->E:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoB1 | D:X-1/2,-Y+1/2,-Z->B:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoD1 | D:x,y,z->D:X-1/2,-Y+1/2,-Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3ddoD1 | D:X-1/2,-Y+1/2,-Z->D:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
