Domain ID e3ddoE1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000364775
Type: Automatic domain
Parent: e3pnpA1
Range: E:5004-5253
Ligands: PO4
PDB: 3ddo
PDB Description: URIDINE PHOSPHORYLASE
UniProt: P0A1F6
Hsap BLAST neighbor: O95045
Species:

Structure of domain e3ddoE1

Structural contacts of domain e3ddoE1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ddoC1 E:x,y,z->C:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3ddoA1 E:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3ddoF1 E:X,Y,Z->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3ddoD1 E:x,y,z->D:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3ddoD1 E:x,y,z->D:-X+1,Y-1/2,-Z+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3ddoA1 E:X-1/2,-Y-1/2,-Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol