| UID: | 000356297 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1iz5A2 |
| Range: | C:119-249 |
| Ligands: | EDO GOL PEG PGE |
| PDB: | 3fds |
| PDB Description: | DNA polymerase sliding clamp B |
| UniProt: | P57766 |
| Species: | Sulfolobus solfataricus |
Structure of domain e3fdsC2
Domains in the same chain:
| e3fdsC1 | C:1-118 | DNA clamp | DNA clamp | DNA clamp |
| e3fdsC2 | C:119-249 | DNA clamp | DNA clamp | DNA clamp |
Domains in the same PDB:
Structural contacts of domain e3fdsC2 of H-group "DNA clamp":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3fdsA5 | C:x,y,z->A:X,Y,Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3fdsA6 | C:x,y,z->A:X,Y,Z | Hypothetical protein Ta1206-like | Interaction Interface Pymol |
| e3fdsA2 | C:x,y,z->A:X,Y,Z | Lesion bypass DNA polymerase (Y-family), little finger domain | Interaction Interface Pymol |
| e3fdsA7 | C:x,y,z->A:X-1,Y,Z | Adenylyl and guanylyl cyclase catalytic domain-like | Interaction Interface Pymol |
| e3fdsA6 | C:x,y,z->A:-X-1,Y-1/2,-Z | Hypothetical protein Ta1206-like | Interaction Interface Pymol |
| e3fdsA2 | C:-X-1,Y-1/2,-Z-1->A:x,y,z | Lesion bypass DNA polymerase (Y-family), little finger domain | Interaction Interface Pymol |
