Domain ID e3hpoA3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_A
UID: 000393931
Type: Automatic domain
Parent: e2hhvA3
Range: A:643-667,A:792-876
Ligands: TTP
PDB: 3hpo
PDB Description: DNA polymerase I, large fragment
Hsap BLAST neighbor: O75417
Species: Geobacillus stearothermophilus

Structure of domain e3hpoA3

Structural contacts of domain e3hpoA3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3hpoA1 A:-X,Y-1/2,-Z+1/2->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e3hpoA4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e3hpoA2 A:-X-1/2,-Y,Z-1/2->A:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol