Domain ID e3j0vH5

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 001157456
Type: Automatic domain
Parent: e1pkpA1
Range: H:1-76
PDB: 3j0v
PDB Description:
Species:

Structure of domain e3j0vH5

Domains in the same chain:

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e3j0vH5 H:1-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j0vH6 H:77-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3j0vF2 F:1-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j0vF1 F:105-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j0vH5 H:1-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j0vH6 H:77-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j0vI1 I:1-135 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j0vJ1 J:1-150 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j0vK1 K:1-63 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j0vK2 K:64-128 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j0vM1 M:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j0vN1 N:1-116 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j0vO1 O:1-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j0vQ1 Q:1-95 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j0vR1 R:1-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j0vS1 S:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j0vU1 U:1-54 HTH HTH tri-helical
e3j0vW1 W:1-84 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3j0vH5 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j0vF1 H:X,Y,Z->F:x,y,z Ribosomal protein S3-C Interaction Interface Pymol