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RIMD
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Summary
Structure view
Domain organization
Domain ID e3j5xZ11
Download files:
FASTA
Coordinates
Conservation
Pymol
domain only
in chain
in PDB
SNVs
A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2
UID:
001207383
Type:
Automatic
domain
Parent:
e1n0uA1
Range:
Z:289-411
PDB:
3j5x
PDB Description:
Hsap BLAST neighbor:
Q96RP9
Species:
Domain
In chain context
In PDB context
Structure of domain e3j5xZ11
Domains in the same chain:
Download Pymol
e3j5xZ9
Z:4-290
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e3j5xZ11
Z:289-411
cradle loop barrel
RIFT-related
Alanine racemase-C
e3j5xZ12
Z:412-489
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e3j5xZ10
Z:490-610
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e3j5xZ3
Z:611-700
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
Domains in the same PDB:
e3j5xC2
C:1-105
Alpha-lytic protease prodomain-like
KH-domains
Prokaryotic type KH domain (KH-domain type II)
e3j5xC1
C:106-206
T-fold
Ribosomal protein S3-C
Ribosomal protein S3-C
e3j5xE2
E:9-76
dsRBD-like
dsRNA-binding domain-like
dsRNA-binding domain-like
e3j5xE1
E:77-158
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e3j5xF1
F:1-100
Alpha-beta plaits
Ribosomal protein S6
Ribosomal protein S6
e3j5xG1
G:1-151
Ribosomal protein S7
Ribosomal protein S7
Ribosomal protein S7
e3j5xH1
H:1-65
R3H domain-like
Ribosomal protein S8, N-terminal domain
Ribosomal protein S8, N-terminal domain
e3j5xH2
H:66-129
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
e3j5xJ1
J:5-102
Alpha-beta plaits
Ribosomal protein S10
Ribosomal protein S10
e3j5xK1
K:12-128
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e3j5xL1
L:1-123
OB-fold
Nucleic acid-binding proteins
Nucleic acid-binding proteins
e3j5xN1
N:1-101
Glucocorticoid receptor-like
LIM domain-like
LIM domain-like
e3j5xO1
O:1-88
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
e3j5xP1
P:1-82
Ribosomal protein S16
Ribosomal protein S16
Ribosomal protein S16
e3j5xR1
R:19-73
HTH
HTH
tri-helical
e3j5xT1
T:2-86
Spectrin repeat-like
Ribosomal protein S20
Ribosomal protein S20
e3j5xU1
U:3-53
30S ribosomal protein S21
30S ribosomal protein S21
30S ribosomal protein S21
e3j5xZ9
Z:4-290
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e3j5xZ11
Z:289-411
cradle loop barrel
RIFT-related
Alanine racemase-C
e3j5xZ12
Z:412-489
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e3j5xZ10
Z:490-610
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e3j5xZ3
Z:611-700
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like