ECOD: domain e3jyvE1

Domain ID e3jyvE1

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: Ribosomal_S5_C

UID:	001663427
Type:	Automatic domain
Parent:	e1pkpA2
Range:	E:145-215
PDB:	3jyv
PDB Description:
Hsap BLAST neighbor:	P15880
Species:

Domain
In chain context
In PDB context

Structure of domain e3jyvE1

Domains in the same chain:

Download Pymol

e3jyvE2	E:75-144	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e3jyvE1	E:145-215	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3jyvC3	C:6-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e3jyvC1	C:92-193	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e3jyvE2	E:75-144	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e3jyvE1	E:145-215	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3jyvG1	G:40-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e3jyvH1	H:6-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e3jyvH2	H:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e3jyvJ1	J:21-116	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e3jyvK1	K:9-133	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3jyvL1	L:29-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3jyvN1	N:5-54	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3jyvO1	O:66-149	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e3jyvR1	R:7-319	beta-propeller-like	beta-propeller	7-bladed
e3jyvT1	T:4-144	HTH	HTH	winged

Structural contacts of domain e3jyvE1 of H-group "Ribosomal protein S5 domain 2-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3jyvH2	E:x,y,z->H:X,Y,Z	Ribosomal protein S8, C-terminal domain	Interaction Interface Pymol