Domain ID e3jyvH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000379894
Type: Automatic domain
Parent: e1i6uA2
Range: H:68-130
PDB: 3jyv
PDB Description:
Hsap BLAST neighbor: P62244
Species:

Structure of domain e3jyvH2

Domains in the same chain:

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e3jyvH1 H:6-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3jyvH2 H:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e3jyvC3 C:6-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3jyvC1 C:92-193 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3jyvE2 E:75-144 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3jyvE1 E:145-215 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3jyvG1 G:40-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3jyvH1 H:6-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3jyvH2 H:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3jyvJ1 J:21-116 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3jyvK1 K:9-133 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3jyvL1 L:29-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3jyvN1 N:5-54 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3jyvO1 O:66-149 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3jyvR1 R:7-319 beta-propeller-like beta-propeller 7-bladed
e3jyvT1 T:4-144 HTH HTH winged

Structural contacts of domain e3jyvH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3jyvE1 H:X,Y,Z->E:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol