ECOD: domain e3k70B9

Domain ID e3k70B9

A: a/b three-layered sandwiches
X: Restriction endonuclease-like
H: Restriction endonuclease-like
T: Restriction endonuclease-like
F: PDDEXK_1

UID:	001230984
Type:	Automatic domain
Parent:	e1w36B3
Range:	B:881-1174
Ligands:	CA
PDB:	3k70
PDB Description:	EXODEOXYRIBONUCLEASE V BETA CHAIN
UniProt:	P08394
Species:

Domains in the same chain:

Download Pymol

e3k70B7	B:3-469	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70B8	B:470-880	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70B9	B:881-1174	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like

Domains in the same PDB:

e3k70B7	B:3-469	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70B8	B:470-880	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70B9	B:881-1174	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e3k70C1	C:1-347	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70C2	C:348-817	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70C3	C:818-1121	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e3k70D3	D:1-109	HTH	HTH	winged
e3k70D5	D:110-349	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70D4	D:350-466,D:524-606	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70E4	E:3-469	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70E5	E:470-880	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70E6	E:881-1174	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e3k70F1	F:1-347	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70F2	F:348-817	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70F3	F:818-1121	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e3k70G3	G:1-109	HTH	HTH	winged
e3k70G5	G:110-349	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k70G4	G:350-466,G:524-606	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e3k70B9 of H-group "Restriction endonuclease-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3k70C1	B:X,Y,Z->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3k70C2	B:X,Y,Z->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3k70E6	B:X,Y,Z->E:x,y,z	Restriction endonuclease-like	Interaction Interface Pymol
e3k70G3	B:x,y,z->G:-X-1/2,-Y,Z-1/2	HTH	Interaction Interface Pymol
e3k70E4	B:x,y,z->E:X-1/2,-Y+1/2,-Z	P-loop domains-related	Interaction Interface Pymol